A collection of Python tools for quantitative Biology
Darren Wilkinson's introduction to ABC
Darren Wilkinson’s introduction to approximate Bayesian computation (“ABC”). See also his post about summary statistics for ABC https://darrenjw.wordpress.com/2013/09/01/summary-stats-for-abc/
All about ENSO, and lunar tides (Paul Pukite)
Historically, ENSO has been explained in terms of winds. But recently — and Dr Paul Pukite has insisted upon this for a long time — the oscillation of ENSO has been explained as a large-scale slosh due to lunar tidal forcing.
Busting Myths About Heat Pumps
Heat pumps are perhaps the most efficient heating and cooling systems available. Recent literature distributed by utilities hawking natural gas and other sources use performance figures from heat pumps as they were available 15 years ago. See today’s.
Why "naive Bayes" is not Bayesian
Explains why the so-called “naive Bayes” classifier is not Bayesian. The setup is okay, but estimating probabilities by doing relative frequencies instead of using Dirichlet conjugate priors or integration strays from The Path.
While it is described as “The mathematical (and other) thoughts of a (now retired) math teacher”, this is false humility, as it chronicles the present and past life and times of mathematicians in their context. Recommended.
Mathematics and Climate Research Network
The Mathematics and Climate Research Network (MCRN) engages mathematicians to collaborating on the cryosphere, conceptual model validation, data assimilation, the electric grid, food systems, nonsmooth systems, paleoclimate, resilience, tipping points.
The Keeling Curve
The first, and one of the best programs for creating a spatially significant long term time series of atmospheric concentrations of CO2. Started amongst great obstacles by one, smart determined guy, Charles David Keeling.
"Warming Slowdown?" (part 1 of 2)
The idea of a global warming slowdown or hiatus is critically examined, emphasizing the literature, the datasets, and means and methods for telling such. In two parts.
Equiterre helps build a social movement by encouraging individuals, organizations and governments to make ecological and equitable choices, in a spirit of solidarity.
"Warming Slowdown?" (part 2 of 2)
The idea of a global warming slowdown or hiatus is critically examined, emphasizing the literature, the datasets, and means and methods for telling such. The second part.
Isaac Held's blog
In the spirit of Ray Pierrehumbert’s “big ideas come from small models” in his textbook, PRINCIPLES OF PLANETARY CLIMATE, Dr Held presents quantitative essays regarding one feature or another of the Earth’s climate and weather system.
I have used dlm almost exclusively, except when extreme efficiency was required. Since Jouni Helske's KFAS was rewritten, though, I'm increasingly drawn to it, because the noise sources it supports are more diverse than dlm's. KFAS uses the notation and approaches of Durbin, Koopman, and Harvey.
``The real problem is that programmers have spent far too much time worrying about efficiency in the wrong places and at the wrong times; premature optimization is the root of all evil (or at least most of it) in programming.'' Professor Donald Knuth, 1974