Category Archives: likelihood-free

cdetools package for R: Dalmasso, et al [updated]

Posted on 7 September 2019 by ecoquant

Just hit the “arXiv streets”: N. Dalmasso, T. Pospisil, A. B. Lee, R. Izbicki, P. E. Freeman, A. I. Malz, “Conditional Density Estimation Tools in Python and R with applications to photometric redshifts and likelihood-free cosmological inference”, arXiv.org > astro-ph … Continue reading →

Posted in ABC, accept-reject methods, astronomy, astrophysics, astrostatistics, Bayes, Bayesian computational methods, likelihood-free, statistical ecology | Leave a comment

Stream flow and P-splines: Using built-in estimates for smoothing

Posted on 28 January 2019 by ecoquant

Mother Brook in Dedham Massachusetts was the first man-made canal in the United States. Dug in 1639, it connects the Charles River at Dedham, to the Neponset River in the Hyde Park section of Boston. It was originally an important … Continue reading →

Posted in American Statistical Association, citizen data, citizen science, Clausius-Clapeyron equation, Commonwealth of Massachusetts, cross-validation, data science, dependent data, descriptive statistics, dynamic linear models, empirical likelihood, environment, flooding, floods, Grant Foster, hydrology, likelihood-free, meteorological models, model-free forecasting, non-mechanistic modeling, non-parametric, non-parametric model, non-parametric statistics, numerical algorithms, precipitation, quantitative ecology, statistical dependence, statistical series, stream flow, Tamino, the bootstrap, time series, water vapor | 2 Comments

Series, symmetrized Normalized Compressed Divergences and their logit transforms

Posted on 3 January 2019 by ecoquant

(Major update on 11th January 2019. Minor update on 16th January 2019.) On comparing things The idea of a calculating a distance between series for various purposes has received scholarly attention for quite some time. The most common application is … Continue reading →

Posted in Akaike Information Criterion, bridge to somewhere, computation, content-free inference, data science, descriptive statistics, divergence measures, engineering, George Sughihara, information theoretic statistics, likelihood-free, machine learning, mathematics, model comparison, model-free forecasting, multivariate statistics, non-mechanistic modeling, non-parametric statistics, numerical algorithms, statistics, theoretical physics, thermodynamics, time series | 4 Comments

Why smooth?

Posted on 8 December 2016 by ecoquant

I’ve encountered a number of blog posts this week which seem not to understand the Bias-Variance Tradeoff in regard to Mean-Squared-Error. These arose in connection with smoothing splines, which I was studying in connection with multivariate adaptive regression splines, that … Continue reading →

Posted in Akaike Information Criterion, American Statistical Association, Antarctica, carbon dioxide, climate change, denial, global warming, information theoretic statistics, likelihood-free, multivariate adaptive regression splines, non-parametric model, science denier, smoothing, splines, statistical dependence | 1 Comment

“Stochastic Parameterization: Towards a new view of weather and climate models”

Posted on 24 July 2016 by ecoquant

Judith Berner, Ulrich Achatz, Lauriane Batté, Lisa Bengtsson, Alvaro De La Cámara, Hannah M. Christensen, Matteo Colangeli, Danielle R. B. Coleman, Daan Crommelin, Stamen I. Dolaptchiev, Christian L.E. Franzke, Petra Friederichs, Peter Imkeller, Heikki Järvinen, Stephan Juricke, Vassili Kitsios, François … Continue reading →

Posted in biology, climate models, complex systems, convergent cross-mapping, data science, dynamical systems, ecology, Ethan Deyle, Floris Takens, George Sughihara, Hao Ye, likelihood-free, Lorenz, mathematics, meteorological models, model-free forecasting, physics, population biology, population dynamics, quantitative biology, quantitative ecology, Scripps Institution of Oceanography, state-space models, statistical dependence, statistics, stochastic algorithms, stochastic search, stochastics, Takens embedding theorem, time series, Victor Brovkin | 4 Comments

Cory Lesmeister’s treatment of Simson’s Paradox (at “Fear and Loathing in Data Science”)

Posted on 7 May 2016 by ecoquant

(Updated 2016-05-08, to provide reference for plateaus of ML functions in vicinity of MLE.) Simpson’s Paradox is one of those phenomena of data which really give Statistics a substance and a role, beyond the roles it inherits from, say, theoretical … Continue reading →

Posted in Akaike Information Criterion, approximate Bayesian computation, Bayes, Bayesian, evidence, Frequentist, games of chance, information theoretic statistics, Kalman filter, likelihood-free, mathematics, maths, maximum likelihood, Monte Carlo Statistical Methods, probabilistic programming, rationality, Rauch-Tung-Striebel, Simpson's Paradox, state-space models, statistical dependence, statistics, stochastics | Leave a comment

p-values and hypothesis tests: the Bayesian(s) rule

Posted on 7 March 2016 by ecoquant

The American Statistical Association of which I am a longtime member issued an important statement today which will hopefully move statistical practice in engineering and especially in the sciences away from the misleading practice of using p-values and hypothesis tests. … Continue reading →

Posted in approximate Bayesian computation, arXiv, Bayes, Bayesian, Bayesian inversion, bollocks, Christian Robert, climate, complex systems, data science, Frequentist, information theoretic statistics, likelihood-free, Markov Chain Monte Carlo, MCMC, Monte Carlo Statistical Methods, population biology, rationality, reasonableness, science, scientific publishing, statistical dependence, statistics, stochastics, Student t distribution | Leave a comment

“Grid shading by simulated annealing” [Martyn Plummer]

Posted on 9 February 2016 by ecoquant

Source: Grid shading by simulated annealing (or what I did on my holidays), aka “fun with GCHQ job adverts”, by Martyn Plummer, developer of JAGS. Excerpt: I wanted to solve the puzzle but did not want to sit down with … Continue reading →